Pseudomonas aeruginosa UCBPP-PA14, PA14_12210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0043165 | Gram-negative-bacterium-type cell outer membrane assembly |
Inferred from Sequence Model
Term mapped from: InterPro:PF04390
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF04390
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 169 | 196 | - |
| Coils | Coil | Coil | - | - | 164 | 194 | - |
| Pfam | PF04390 | Lipopolysaccharide-assembly | IPR007485 | LPS-assembly lipoprotein LptE | 35 | 155 | 1.8E-9 |
| FunFam | G3DSA:3.30.160.150:FF:000003 | LPS-assembly lipoprotein LptE | - | - | 18 | 183 | 7.6E-114 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 166 | 207 | - |
| Hamap | MF_01186 | LPS-assembly lipoprotein LptE [lptE]. | IPR007485 | LPS-assembly lipoprotein LptE | 5 | 161 | 23.468245 |
| PANTHER | PTHR38098 | LPS-ASSEMBLY LIPOPROTEIN LPTE | IPR007485 | LPS-assembly lipoprotein LptE | 1 | 193 | 3.1E-56 |
| Gene3D | G3DSA:3.30.160.150 | Lipoprotein like domain | - | - | 18 | 183 | 2.4E-49 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.