Pseudomonas aeruginosa UCBPP-PA14, PA14_12570

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0043565	sequence-specific DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00033	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	41	60	3.2E-19
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	30	41	3.2E-19
FunFam	G3DSA:3.30.70.920:FF:000008	Transcriptional regulator, AsnC family	-	-	67	152	3.8E-35
CDD	cd00090	HTH_ARSR	IPR011991	ArsR-like helix-turn-helix domain	15	63	1.84291E-8
PANTHER	PTHR30154	LEUCINE-RESPONSIVE REGULATORY PROTEIN	-	-	11	161	1.3E-42
Pfam	PF13412	Winged helix-turn-helix DNA-binding	-	-	14	60	4.0E-23
Pfam	PF01037	Lrp/AsnC ligand binding domain	IPR019887	Transcription regulator AsnC/Lrp, ligand binding domain	80	155	4.5E-22
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	15	66	6.3E-25
SMART	SM00344	asnc	IPR019888	Transcription regulator AsnC-like	14	124	2.0E-43
Gene3D	G3DSA:3.30.70.920	-	-	-	67	152	1.3E-27
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	5	132	3.13E-22
PRINTS	PR00033	AsnC bacterial regulatory protein HTH signature	IPR000485	AsnC-type HTH domain	14	30	3.2E-19
FunFam	G3DSA:1.10.10.10:FF:000104	AsnC family transcriptional regulator	-	-	15	66	1.4E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.