Pseudomonas aeruginosa UCBPP-PA14, PA14_12630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004386 helicase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04408
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other UCBPP-PA14 genes in this class
DNA replication, recombination, modification and repair Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00847 ha2_5 IPR007502 Helicase-associated domain 385 488 7.4E-17
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 67 154 1.94E-9
Pfam PF00271 Helicase conserved C-terminal domain IPR001650 Helicase, C-terminal 202 325 3.0E-14
Gene3D G3DSA:1.20.120.1080 - - - 370 484 3.0E-13
Pfam PF04408 Helicase associated domain (HA2) IPR007502 Helicase-associated domain 386 446 5.7E-8
NCBIfam TIGR01970 JCVI: ATP-dependent helicase HrpB IPR010225 ATP-dependent helicase HrpB 67 829 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 33 60 -
FunFam G3DSA:1.20.120.1080:FF:000055 ATP-dependent helicase HrpB - - 369 481 1.9E-34
PANTHER PTHR43519 ATP-DEPENDENT RNA HELICASE HRPB - - 67 829 0.0
CDD cd18791 SF2_C_RHA - - 176 334 1.62327E-64
SMART SM00490 helicmild6 IPR001650 Helicase, C-terminal 222 326 6.5E-19
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 39 174 1.5E-30
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 175 343 9.7E-56
PIRSF PIRSF005496 ATP_hel_HrpB IPR010225 ATP-dependent helicase HrpB 64 830 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 35 49 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 173 438 6.02E-50
Pfam PF08482 ATP-dependent helicase C-terminal IPR013689 ATP-dependent RNA helicase HrpB, C-terminal 686 817 2.4E-52

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.