Pseudomonas aeruginosa UCBPP-PA14, PA14_14850 (pilF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046903 secretion
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3805
 ECO:0000249
sequence similarity evidence used in automatic assertion		 18776008
Biological Process GO:0009297 pilus assembly
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3805
 ECO:0000249
sequence similarity evidence used in automatic assertion		 18776008
Biological Process GO:0043683 type IV pilus biogenesis
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA3805
 ECO:0000249
sequence similarity evidence used in automatic assertion		 18776008
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48452
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other UCBPP-PA14 genes in this class
Motility & Attachment Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 71 104 42.0
Pfam PF13424 Tetratricopeptide repeat - - 105 172 1.6E-8
Pfam PF13414 TPR repeat - - 47 82 9.0E-7
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 37 70 0.003
FunFam G3DSA:1.25.40.10:FF:001817 Type 4 fimbrial biogenesis protein PilF - - 33 251 1.2E-119
PANTHER PTHR44186 - - - 35 203 5.1E-17
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 32 252 2.8E-61
SMART SM00028 tpr_5 IPR019734 Tetratricopeptide repeat 141 174 5.2E-4
NCBIfam TIGR02521 JCVI: type IV pilus biogenesis/stability protein PilW IPR013360 Pilus biogenesis/stability type IV, PilW 10 240 1.6E-73
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 38 203 1.37E-24

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.