Pseudomonas aeruginosa UCBPP-PA14, PA14_16500 (wspR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chemotaxis Other UCBPP-PA14 genes in this class
Motility & Attachment Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 167 335 2.2E-51
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 172 333 4.8E-50
CDD cd01949 GGDEF IPR000160 GGDEF domain 174 334 5.37223E-68
Gene3D G3DSA:3.40.50.2300 - - - 1 155 1.6E-34
PANTHER PTHR45138 REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM - - 59 334 3.2E-74
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 19 133 3.6E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 21 133 3.8E-19
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 156 339 8.4E-63
CDD cd17575 REC_WspR-like - - 19 146 8.97638E-88
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 166 338 7.3E-55
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 176 336 4.94E-49
SMART SM00267 duf1_3 IPR000160 GGDEF domain 160 337 6.6E-61
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 19 151 1.01E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.