Pseudomonas aeruginosa UCBPP-PA14, PA14_24710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00038
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.2300:FF:000267 Virulence factors transcription regulator - - 3 207 3.1E-126
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 147 161 4.9E-12
PANTHER PTHR45566 HTH-TYPE TRANSCRIPTIONAL REGULATOR YHJB-RELATED - - 2 200 2.6E-36
Pfam PF00196 Bacterial regulatory proteins, luxR family IPR000792 Transcription regulator LuxR, C-terminal 147 201 5.2E-21
SMART SM00421 luxrmega5 IPR000792 Transcription regulator LuxR, C-terminal 144 201 1.3E-21
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2 170 2.85E-30
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2 114 4.0E-30
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 177 189 4.9E-12
Gene3D G3DSA:3.40.50.2300 - - - 3 207 5.6E-52
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 115 5.2E-26
CDD cd06170 LuxR_C_like IPR000792 Transcription regulator LuxR, C-terminal 147 203 2.33132E-18
PRINTS PR00038 LuxR bacterial regulatory protein HTH signature IPR000792 Transcription regulator LuxR, C-terminal 161 177 4.9E-12
CDD cd17535 REC_NarL-like - - 4 119 4.66935E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.