Pseudomonas aeruginosa UCBPP-PA14, PA14_39890 (phzF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00654
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00654
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
PseudoCAP Phenazine biosynthesis ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR13774 PHENAZINE BIOSYNTHESIS PROTEIN IPR003719 Phenazine biosynthesis PhzF-like 3 275 1.3E-36
Pfam PF02567 Phenazine biosynthesis-like protein IPR003719 Phenazine biosynthesis PhzF-like 7 274 3.2E-85
Gene3D G3DSA:3.10.310.10 Diaminopimelate Epimerase; Chain A, domain 1 - - 7 119 9.0E-100
SUPERFAMILY SSF54506 Diaminopimelate epimerase-like - - 2 277 2.79E-67
NCBIfam TIGR00654 JCVI: PhzF family phenazine biosynthesis isomerase IPR003719 Phenazine biosynthesis PhzF-like 5 273 2.1E-55
PIRSF PIRSF016184 Ismrse_PhzF IPR003719 Phenazine biosynthesis PhzF-like 1 278 8.0E-82
Gene3D G3DSA:3.10.310.10 Diaminopimelate Epimerase; Chain A, domain 1 - - 120 266 9.0E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.