Pseudomonas aeruginosa UCBPP-PA14, PA14_46240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF82689
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00924
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain IPR011066 Mechanosensitive ion channel MscS, C-terminal 700 792 4.18E-14
SUPERFAMILY SSF50182 Sm-like ribonucleoproteins IPR010920 LSM domain superfamily 626 691 6.21E-16
Gene3D G3DSA:3.30.70.100 - - - 699 786 3.0E-11
Coils Coil Coil - - 118 138 -
Gene3D G3DSA:1.10.287.1260 - - - 540 640 3.3E-16
PANTHER PTHR30347 POTASSIUM CHANNEL RELATED - - 277 805 1.7E-99
SUPERFAMILY SSF82861 Mechanosensitive channel protein MscS (YggB), transmembrane region IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 540 624 3.92E-13
Pfam PF12607 Protein of unknown function (DUF3772) IPR022249 Domain of unknown function DUF3772 140 200 9.2E-19
Gene3D G3DSA:2.30.30.60 - IPR023408 Mechanosensitive ion channel MscS, beta-domain superfamily 641 689 2.6E-14
Pfam PF00924 Mechanosensitive ion channel IPR006685 Mechanosensitive ion channel MscS 584 781 4.5E-42
Coils Coil Coil - - 75 95 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.