Pseudomonas aeruginosa UCBPP-PA14, PA14_49470 (nrdB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005506 iron ion binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1155
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16829681
Biological Process GO:0009263 deoxyribonucleotide biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1155
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16829681
Cellular Component GO:0005971 ribonucleoside-diphosphate reductase complex
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1155
 ECO:0000249
sequence similarity evidence used in automatic assertion		 16829681
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.620.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009263 deoxyribonucleotide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000355
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Nucleotide biosynthesis and metabolism Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Purine metabolism; Pyrimidine metabolism  ECO:0000037
not_recorded
KEGG pau00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR23409 RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN IPR000358 Ribonucleotide reductase small subunit family 92 410 1.1E-68
Pfam PF00268 Ribonucleotide reductase, small chain IPR000358 Ribonucleotide reductase small subunit family 95 382 1.8E-87
CDD cd01049 RNRR2 IPR033909 Ribonucleotide reductase small subunit 95 391 8.53956E-114
MobiDBLite mobidb-lite consensus disorder prediction - - 1 51 -
PIRSF PIRSF000355 NrdB IPR000358 Ribonucleotide reductase small subunit family 64 415 0.0
FunFam G3DSA:1.10.620.20:FF:000003 Ribonucleoside-diphosphate reductase subunit beta - - 68 396 0.0
Gene3D G3DSA:1.10.620.20 Ribonucleotide Reductase, subunit A IPR012348 Ribonucleotide reductase-like 68 396 6.3E-98
SUPERFAMILY SSF47240 Ferritin-like IPR009078 Ferritin-like superfamily 56 388 5.73E-98
MobiDBLite mobidb-lite consensus disorder prediction - - 28 51 -
MobiDBLite mobidb-lite consensus disorder prediction - - 1 15 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.