Pseudomonas aeruginosa UCBPP-PA14, PA14_49970

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00664
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00664
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.1560.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.1560.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other UCBPP-PA14 genes in this class
Transport of small molecules Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1560.10 ABC transporter type 1, transmembrane domain IPR036640 ABC transporter type 1, transmembrane domain superfamily 6 329 7.4E-71
Pfam PF00664 ABC transporter transmembrane region IPR011527 ABC transporter type 1, transmembrane domain 30 297 1.1E-50
CDD cd18575 ABC_6TM_bac_exporter_ABCB8_10_like - - 30 318 0.0
PANTHER PTHR43394 ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL IPR039421 Type 1 protein exporter 27 582 0.0
NCBIfam TIGR02204 JCVI: ABC transporter, permease/ATP-binding protein IPR011918 ABC transporter, ATP-binding/permease protein 9 583 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 338 583 1.04E-87
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 336 585 8.0E-91
SUPERFAMILY SSF90123 ABC transporter transmembrane region IPR036640 ABC transporter type 1, transmembrane domain superfamily 16 323 5.62E-73
FunFam G3DSA:1.20.1560.10:FF:000098 Probable ATP-binding/permease fusion ABC transporter - - 5 328 0.0
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 364 512 1.0E-31
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 372 574 1.4E-17
FunFam G3DSA:3.40.50.300:FF:000218 Multidrug ABC transporter ATP-binding protein - - 338 585 2.7E-95

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.