Pseudomonas aeruginosa UCBPP-PA14, PA14_51410 (pqsC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044550 secondary metabolite biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0998
 ECO:0000249
sequence similarity evidence used in automatic assertion		 12426334
Molecular Function GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08545
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53901
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006633 fatty acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08545
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Biosynthesis of cofactors, prosthetic groups and carriers Other UCBPP-PA14 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pau02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pau02024 Quorum sensing 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IPR013751 Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal 124 200 1.7E-18
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 191 348 3.1E-39
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 7 342 2.46E-41
Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747 Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal 253 341 4.6E-21
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 1 190 8.7E-54
PANTHER PTHR34069 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3 - - 1 342 3.5E-89

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.