Pseudomonas aeruginosa UCBPP-PA14, PA14_51840

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003676	nucleic acid binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00050	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other UCBPP-PA14 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd04458	CSP_CDS	IPR002059	Cold-shock protein, DNA-binding	139	199	3.15473E-31
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	112	136	-
Pfam	PF00313	'Cold-shock' DNA-binding domain	IPR002059	Cold-shock protein, DNA-binding	139	200	1.7E-25
NCBIfam	NF041604	NCBIFAM: cold shock protein N-terminal extension domain	IPR048090	Cold shock protein-like, N-terminal extension domain	1	109	5.2E-40
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	140	155	1.9E-15
Gene3D	G3DSA:2.40.50.140	-	IPR012340	Nucleic acid-binding, OB-fold	130	204	5.8E-26
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	160	169	1.9E-15
SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	IPR012340	Nucleic acid-binding, OB-fold	137	200	3.67E-22
PANTHER	PTHR11544	COLD SHOCK DOMAIN CONTAINING PROTEINS	-	-	138	201	1.8E-19
SMART	SM00357	csp_8	IPR011129	Cold shock domain	139	202	6.5E-25
PRINTS	PR00050	Cold shock protein signature	IPR002059	Cold-shock protein, DNA-binding	175	193	1.9E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.