Pseudomonas aeruginosa UCBPP-PA14, PA14_18410 (algF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_18410
Name
algF
Replicon chromosome
Genomic location 1580299 - 1580949 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789615.1
GI 116051548
Entrez 4381514
INSDC ABJ12784.1
NCBI Locus Tag PA14_18410
UniParc UPI00003960E9
UniProtKB Acc Q02R21
UniProtKB ID Q02R21_PSEAB
UniRef100 UniRef100_Q02R21
UniRef50 UniRef50_Q06062
UniRef90 UniRef90_Q06062

Product

Feature Type CDS
Coding Frame 1
Product Name
alginate o-acetyltransferase AlgF
Synonyms
Evidence for Translation
Charge (pH 7) 8.40
Kyte-Doolittle Hydrophobicity Value -0.255
Molecular Weight (kDa) 22.9
Isoelectric Point (pI) 9.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6D10 CELL ADHESION 04/11/18 CS-rosetta determined structures of the C-terminal domain of AlgF from P. aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) NOT SOLUTION NMR, SOLUTION SCATTERING 99.5
6CZT CELL ADHESION 04/09/18 CS-rosetta determined structures of the N-terminal domain of AlgF from P. aeruginosa Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) NOT SOLUTION NMR 99.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 5 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002116 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_18410
Search term: algF

Human Homologs

References

No references are associated with this feature.