Pseudomonas aeruginosa UCBPP-PA14, PA14_21550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_21550
Name
Replicon chromosome
Genomic location 1868892 - 1869503 (+ strand)
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789868.1
GI 116051300
Entrez 4381285
INSDC ABJ12536.1
NCBI Locus Tag PA14_21550
UniParc UPI00000C5991
UniProtKB Acc Q02QB8
UniProtKB ID Q02QB8_PSEAB
UniRef100 UniRef100_A0A077JQ37
UniRef50 UniRef50_Q4KGH3
UniRef90 UniRef90_A6V2D2

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase ECF-subfamily sigma-70 factor
Synonyms
Evidence for Translation
Charge (pH 7) -5.37
Kyte-Doolittle Hydrophobicity Value -0.318
Molecular Weight (kDa) 22.8
Isoelectric Point (pI) 5.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 416 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002328 (417 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_21550

Human Homologs

References

No references are associated with this feature.