Pseudomonas aeruginosa UCBPP-PA14, PA14_21640

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_21640
Name
Replicon chromosome
Genomic location 1876590 - 1877402 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789877.1
GI 116051291
Entrez 4381276
INSDC ABJ12527.1
NCBI Locus Tag PA14_21640
UniParc UPI0000E44999
UniProtKB Acc Q02QA9
UniProtKB ID Q02QA9_PSEAB
UniRef100 UniRef100_W0YV74
UniRef50 UniRef50_W6QXS1
UniRef90 UniRef90_Q9HYW4

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.16
Kyte-Doolittle Hydrophobicity Value 0.011
Molecular Weight (kDa) 29.3
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002336 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_21640

Human Homologs

Ensembl 110, assembly GRCh38.p14
short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
E-value: 4.7e-20
Percent Identity: 30.7
Ensembl 110, assembly GRCh38.p14
short chain dehydrogenase/reductase family 16C member 5 [Source:HGNC Symbol;Acc:HGNC:30311]
E-value: 4.7e-20
Percent Identity: 30.7

References

No references are associated with this feature.