Pseudomonas aeruginosa UCBPP-PA14, PA14_21790 (rdgC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_21790
Name
rdgC
Replicon chromosome
Genomic location 1895247 - 1896167 (- strand)
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789891.1
GI 116051277
Entrez 4381262
INSDC ABJ12513.1
NCBI Locus Tag PA14_21790
UniParc UPI0000396023
UniProtKB Acc Q02Q95
UniProtKB ID RDGC_PSEAB
UniRef100 UniRef100_B7V7J4
UniRef50 UniRef50_Q9HYX7
UniRef90 UniRef90_Q9HYX7

Product

Feature Type CDS
Coding Frame 1
Product Name
recombination associated protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.11
Kyte-Doolittle Hydrophobicity Value -0.193
Molecular Weight (kDa) 34.0
Isoelectric Point (pI) 4.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2OWY DNA BINDING PROTEIN 02/17/07 The recombination-associated protein RdgC adopts a novel toroidal architecture for DNA binding Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 99.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002347 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_21790
Search term: rdgC

Human Homologs

References

No references are associated with this feature.