Pseudomonas aeruginosa PAO1, PA3965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3965
Name
Replicon chromosome
Genomic location 4444978 - 4445487 (+ strand)
Transposon Mutants 8 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252654.1
GI 15599160
Affymetrix PA3965_at
DNASU PaCD00007733
Entrez 878888
GenBank AAG07352.1
INSDC AAG07352.1
NCBI Locus Tag PA3965
protein_id(GenBank) gb|AAG07352.1|AE004814_7|gnl|PseudoCAP|PA3965
TIGR NTL03PA03965
UniParc UPI00000C5BA1
UniProtKB Acc Q9HX51
UniProtKB ID Q9HX51_PSEAE
UniRef100 UniRef100_W0YY02
UniRef50 UniRef50_U2G2J5
UniRef90 UniRef90_S6ARF2

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -3.13
Kyte-Doolittle Hydrophobicity Value -0.157
Molecular Weight (kDa) 19.3
Isoelectric Point (pI) 5.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 432 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001714 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3965

Human Homologs

References

No references are associated with this feature.