Pseudomonas aeruginosa PAO1, PA0287 (gpuP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
transcription initiation site 322122 322122 +
16339950 Details
-35 element (sigma 70) 322086 322091 +
16339950 Details
-10 element (sigma 70) 322109 322114 +
16339950 Details
Inverted repeat: GCCAGGCGCT-N17-AGCGCCTGGC 321757 321793 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Inverted repeat: GCAACGCGCCGGC-N4-GCCGGCGCGTTGC 321984 322013 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Rho-independent transcription terminator TERM 57 321983 322014 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details
Rho-independent transcription terminator TERM 58 321984 322013 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
gpuA promoter 323272 323521 +
Details
transcription initiation site 323320 323320 +
16339950 Details
-35 element (sigma 70) 323280 323285 +
16339950 Details
-10 element (sigma 70) 323305 323310 +
16339950 Details
transcription initiation site 323317 323317 +
16339950 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GCGCCGGGCG-N1-CGCCCGGCGC 323568 323588 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		10827456 Details
Rho-independent transcription terminator TERM 59 323568 323588 + ECO:0000246
computational combinatorial evidence used in automatic assertion 		17313685 Details