Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0604
|
Name |
agtB
|
Replicon | chromosome |
Genomic location | 665948 - 666994 (+ strand) |
Transposon Mutants | 5 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
Comment | Structural similarity to 4I1D (ABC transporter substrate-binding protein from Bradyrhizobium japonicum, root-mean-square deviation: 0.8 angstroms). Sequence similarity to 4EUO (99%/36,22%) (ABU). Final predicted ligand: gamma-aminobutyric acid (PMID: 31631799) |
RefSeq | NP_249295.1 |
GI | 15595801 |
Affymetrix | PA0604_at |
DNASU | PaCD00006265 |
Entrez | 879023 |
GenBank | AAG03993.1 |
INSDC | AAG03993.1 |
NCBI Locus Tag | PA0604 |
protein_id(GenBank) | gb|AAG03993.1|AE004496_9|gnl|PseudoCAP|PA0604 |
TIGR | NTL03PA00605 |
UniParc | UPI00000C50D4 |
UniProtKB Acc | Q9I5T4 |
UniProtKB ID | Q9I5T4_PSEAE |
UniRef100 | UniRef100_S0IV94 |
UniRef50 | UniRef50_I3UHC8 |
UniRef90 | UniRef90_W0YM22 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
AgtB
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.09 |
Kyte-Doolittle Hydrophobicity Value | -0.277 |
Molecular Weight (kDa) | 38.2 |
Isoelectric Point (pI) | 5.62 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 170 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000587 (511 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0604
Search term: agtB
Search term: AgtB
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Functional characterization of the agtABCD and agtSR operons for 4-aminobutyrate and 5-aminovalerate uptake and regulation in Pseudomonas aeruginosa PAO1.
Chou HT, Li JY, Lu CD
Curr Microbiol 2014 Jan;68(1):59-63
PubMed ID: 23982201
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|