Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0797
|
Name |
pmiR
|
Replicon | chromosome |
Genomic location | 875113 - 875835 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_249488.1 |
GI | 15595994 |
Affymetrix | PA0797_at |
DNASU | PaCD00006361 |
Entrez | 877945 |
GenBank | AAG04186.1 |
INSDC | AAG04186.1 |
NCBI Locus Tag | PA0797 |
protein_id(GenBank) | gb|AAG04186.1|AE004515_2|gnl|PseudoCAP|PA0797 |
TIGR | NTL03PA00798 |
UniParc | UPI00000C515A |
UniProtKB Acc | Q9I5E1 |
UniProtKB ID | Q9I5E1_PSEAE |
UniRef100 | UniRef100_A0A069Q4N7 |
UniRef50 | UniRef50_G8Q028 |
UniRef90 | UniRef90_W0YMM0 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
PmiR
|
Synonyms |
pqs regulation and MIC receptor, PmiR |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -1.65 |
Kyte-Doolittle Hydrophobicity Value | -0.504 |
Molecular Weight (kDa) | 27.3 |
Isoelectric Point (pI) | 6.68 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7XP0 | SIGNALING PROTEIN | 05/02/22 | Crystal structure of PmiR from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2.61 | X-RAY DIFFRACTION | 100.0 |
7XP1 | SIGNALING PROTEIN | 05/02/22 | Crystal structure of PmiR from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2.5 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 396 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000770 (535 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0797
Search term: pmiR
Search term: PmiR
|
Genetic instability in Streptomyces ambofaciens: inducibility and associated genome plasticity.
Simonet JM, Schneider D, Volff JN, Dary A, Decaris B
Gene 1992 Jun 15;115(1-2):49-54
PubMed ID: 1612449
|
PmiR senses 2-methylisocitrate levels to regulate bacterial virulence in Pseudomonas aeruginosa.
Cui G, Zhang Y, Xu X, Liu Y, Li Z, Wu M, Liu J, Gan J, Liang H
Sci Adv 2022 Dec 9;8(49):eadd4220
PubMed ID: 36475801
|