Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0799
|
Name |
|
Replicon | chromosome |
Genomic location | 876617 - 878608 (- strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Comment | Translation confirmed using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer. Coordinates verified using RT-PCR (PMID:24291602). |
RefSeq | NP_249490.1 |
GI | 15595996 |
Affymetrix | PA0799_at |
Entrez | 878028 |
GenBank | AAG04188.1 |
INSDC | AAG04188.1 |
NCBI Locus Tag | PA0799 |
protein_id(GenBank) | gb|AAG04188.1|AE004515_4|gnl|PseudoCAP|PA0799 |
TIGR | NTL03PA00800 |
UniParc | UPI00000C515C |
UniProtKB Acc | Q9I5D9 |
UniProtKB ID | Q9I5D9_PSEAE |
UniRef100 | UniRef100_W0YMD9 |
UniRef50 | UniRef50_A4XXC6 |
UniRef90 | UniRef90_A6VAH6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable helicase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -5.91 |
Kyte-Doolittle Hydrophobicity Value | -0.270 |
Molecular Weight (kDa) | 75.0 |
Isoelectric Point (pI) | 6.23 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000772 (533 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0799
Search term: probable helicase
|
Ensembl
110, assembly
GRCh38.p14
|
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
E-value:
1.5e-75
Percent Identity:
38.3
|
LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel open reading frames.
Kumari H, Murugapiran SK, Balasubramanian D, Schneper L, Merighi M, Sarracino D, Lory S, Mathee K
J Proteomics 2014 Jan 16;96:328-342
PubMed ID: 24291602
|