Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1288
|
Name |
odsT
Synonym: fadL Synonym: ompP1 |
Replicon | chromosome |
Genomic location | 1399231 - 1400505 (- strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Localication to outer membrane vesicle confirmed in three separate studies (PMID:22909304, PMID:21751344 and PMID:26303878). |
RefSeq | NP_249979.1 |
GI | 15596485 |
Affymetrix | PA1288_at |
Entrez | 881473 |
GenBank | AAG04677.1 |
INSDC | AAG04677.1 |
NCBI Locus Tag | PA1288 |
protein_id(GenBank) | gb|AAG04677.1|AE004558_6|gnl|PseudoCAP|PA1288 |
TIGR | NTL03PA01289 |
UniParc | UPI00000C52F0 |
UniProtKB Acc | Q9I456 |
UniProtKB ID | Q9I456_PSEAE |
UniRef100 | UniRef100_A0A069Q437 |
UniRef50 | UniRef50_A0A069Q437 |
UniRef90 | UniRef90_A0A069Q437 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
oxylipin transporter
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
Detected using LC-MS/MS (45.56 kDa, PMID:21751344)
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -3.56 |
Kyte-Doolittle Hydrophobicity Value | -0.263 |
Molecular Weight (kDa) | 45.6 |
Isoelectric Point (pI) | 5.98 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 203 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001233 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1288
Search term: odsT
Search term: oxylipin transporter
|
Nucleotide sequencing and expression of the fadL gene involved in long-chain fatty acid transport in Escherichia coli.
Said B, Ghosn CR, Vu L, Nunn WD
Mol Microbiol 1988 May;2(3):363-70
PubMed ID: 2840553
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Proteomic analysis of outer membrane vesicles derived from Pseudomonas aeruginosa.
Choi DS, Kim DK, Choi SJ, Lee J, Choi JP, Rho S, Park SH, Kim YK, Hwang D, Gho YS
Proteomics 2011 Aug;11(16):3424-9
PubMed ID: 21751344
|
Identification of proteins associated with the Pseudomonas aeruginosa biofilm extracellular matrix.
Toyofuku M, Roschitzki B, Riedel K, Eberl L
J Proteome Res 2012 Oct 5;11(10):4906-15
PubMed ID: 22909304
|
Proteome Profiles of Outer Membrane Vesicles and Extracellular Matrix of Pseudomonas aeruginosa Biofilms.
Couto N, Schooling SR, Dutcher JR, Barber J
J Proteome Res 2015 Oct 2;14(10):4207-22
PubMed ID: 26303878
|
Pseudomonas aeruginosa Secretes the Oxylipin Autoinducer Synthases OdsA and OdsB via the Xcp Type 2 Secretion System.
Martínez E, Orihuela CJ, Campos-Gomez J
J Bacteriol 2022 Jul 19;204(7):e0011422
PubMed ID: 35658521
|