Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA1659
|
Name |
hsiF2
Synonym: tssE2 |
Replicon | chromosome |
Genomic location | 1807241 - 1807648 (+ strand) |
Transposon Mutants | 1 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Hcp Secretion Island-II-encoded type VI secretion system (H2-T6SS) |
RefSeq | NP_250350.1 |
GI | 15596856 |
Affymetrix | PA1659_at |
Entrez | 880734 |
GenBank | AAG05048.1 |
INSDC | AAG05048.1 |
NCBI Locus Tag | PA1659 |
protein_id(GenBank) | gb|AAG05048.1|AE004593_10|gnl|PseudoCAP|PA1659 |
TIGR | NTL03PA01660 |
UniParc | UPI00000C5431 |
UniProtKB Acc | Q9I366 |
UniProtKB ID | Q9I366_PSEAE |
UniRef100 | UniRef100_Q9I366 |
UniRef50 | UniRef50_Q9I366 |
UniRef90 | UniRef90_Q9I366 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
HsiF2
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.56 |
Kyte-Doolittle Hydrophobicity Value | -0.187 |
Molecular Weight (kDa) | 14.7 |
Isoelectric Point (pI) | 5.20 |
Individual Mappings | |
Additional evidence for subcellular localization |
Source 1 | |
Database | PseudoCAP |
Category | Hcp secretion island-2 encoded type VI secretion system (H2-T6SS) |
Evidence |
ECO:0000317
genomic context evidence used in manual assertion
|
Host Organism | Homo sapiens |
Notes | H2-T6SS rendered inactive via clpV2 deletion. |
Reference | 22665491 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 48 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000086 (815 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA1659
Search term: hsiF2
Search term: HsiF2
|
Structure-function analysis of HsiF, a gp25-like component of the type VI secretion system, in Pseudomonas aeruginosa.
Lossi NS, Dajani R, Freemont P, Filloux A
Microbiology (Reading) 2011 Dec;157(Pt 12):3292-3305
PubMed ID: 21873404
|
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A
Proc Natl Acad Sci U S A 2017 Jul 18;114(29):7707-7712
PubMed ID: 28673999
|