Pseudomonas aeruginosa PAO1, PA2657 (bqsR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071282 cellular response to iron(II) ion
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA14_29730
 ECO:0000250
sequence similarity evidence used in manual assertion		 22194456 Reviewed by curator
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class
Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:6.10.250.690 - - - 81 117 7.3E-16
PANTHER PTHR48111 REGULATOR OF RPOS IPR039420 Transcriptional regulatory protein WalR-like 1 217 9.9E-49
CDD cd00383 trans_reg_C IPR001867 OmpR/PhoB-type DNA-binding domain 133 216 5.12729E-31
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1 112 7.1E-36
FunFam G3DSA:3.40.50.2300:FF:000002 DNA-binding response regulator PhoP - - 1 80 3.4E-26
Pfam PF00486 Transcriptional regulatory protein, C terminal IPR001867 OmpR/PhoB-type DNA-binding domain 147 216 5.7E-22
SMART SM00862 Trans_reg_C_3 IPR001867 OmpR/PhoB-type DNA-binding domain 146 217 2.9E-25
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 4 112 1.6E-22
FunFam G3DSA:1.10.10.10:FF:000005 Two-component system response regulator - - 122 219 2.3E-28
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1 118 3.42E-36
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 118 219 2.4E-28
CDD cd19934 REC_OmpR_EcPhoP-like - - 3 119 2.24719E-65
SUPERFAMILY SSF46894 C-terminal effector domain of the bipartite response regulators IPR016032 Signal transduction response regulator, C-terminal effector 123 217 2.83E-25
Gene3D G3DSA:3.40.50.2300 - - - 1 80 1.2E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.