Pseudomonas aeruginosa PAO1, PA2889 (atuD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0071454	cellular response to anoxia	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA14_26570	ECO:0000250 sequence similarity evidence used in manual assertion	28533471	Reviewed by curator
Biological Process	GO:0046247	terpene catabolic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	18310025	Reviewed by curator
Molecular Function	GO:0034824	citronellyl-CoA dehydrogenase activity	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18310025	Reviewed by curator
Biological Process	GO:0035556	intracellular signal transduction	ISS Inferred from Sequence or Structural Similarity Term mapped from: PseudoCAP:PA14_26570	ECO:0000250 sequence similarity evidence used in manual assertion	28533471	Reviewed by curator
Biological Process	GO:0046247	terpene catabolic process	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	18310025	Reviewed by curator
Molecular Function	GO:0050660	flavin adenine dinucleotide binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.540.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.540.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Putative enzymes Other PAO1 genes in this class

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pae00281	Geraniol degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
PseudoCyc	PWYB-5720	Acylic monoterpene utilization	19.5	ECO:0000250 sequence similarity evidence used in manual assertion	12867747

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PIRSF	PIRSF016578	PIGM	-	-	125	362	4.0E-11
Gene3D	G3DSA:2.40.110.10	-	IPR046373	Acyl-CoA oxidase/dehydrogenase, middle domain superfamily	121	233	1.8E-43
PIRSF	PIRSF016578	PIGM	-	-	3	82	8.6
Gene3D	G3DSA:1.20.140.10	-	-	-	234	378	5.0E-43
SUPERFAMILY	SSF56645	Acyl-CoA dehydrogenase NM domain-like	IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	2	241	2.62E-82
FunFam	G3DSA:2.40.110.10:FF:000002	Acyl-CoA dehydrogenase fadE12	-	-	121	233	1.2E-40
Pfam	PF02770	Acyl-CoA dehydrogenase, middle domain	IPR006091	Acyl-CoA oxidase/dehydrogenase, middle domain	122	217	9.6E-25
SUPERFAMILY	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like	IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	229	377	3.22E-44
Gene3D	G3DSA:1.10.540.10	-	IPR037069	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	1	119	3.5E-37
FunFam	G3DSA:1.10.540.10:FF:000047	Putative acyl-CoA dehydrogenase	-	-	1	119	1.5E-80
Pfam	PF02771	Acyl-CoA dehydrogenase, N-terminal domain	IPR013786	Acyl-CoA dehydrogenase/oxidase, N-terminal	4	118	5.1E-33
FunFam	G3DSA:1.20.140.10:FF:000048	Putative acyl-CoA dehydrogenase	-	-	234	378	1.9E-99
Pfam	PF00441	Acyl-CoA dehydrogenase, C-terminal domain	IPR009075	Acyl-CoA dehydrogenase/oxidase, C-terminal	229	375	6.6E-43
PANTHER	PTHR48083	MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED	-	-	2	375	4.9E-130

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.