Pseudomonas aeruginosa PAO1, PA3068 (gdhB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006520 cellular amino acid metabolic process
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Molecular Function GO:0004352 glutamate dehydrogenase (NAD+) activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43403
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019551 glutamate catabolic process to 2-oxoglutarate
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43403
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00430 Taurine and hypotaurine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pae01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF036761 GDH_Mll4104 IPR007780 NAD-glutamate dehydrogenase, bacteria 2 1614 0.0
Coils Coil Coil - - 1227 1247 -
Coils Coil Coil - - 717 737 -
SUPERFAMILY SSF53223 Aminoacid dehydrogenase-like, N-terminal domain IPR046346 Aminoacid dehydrogenase-like, N-terminal domain superfamily 761 962 5.18E-27
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 951 1245 2.82E-28
Pfam PF05088 Bacterial NAD-glutamate dehydrogenase IPR028971 NAD-glutamate dehydrogenase 77 1607 0.0
Gene3D G3DSA:3.40.50.720 - - - 944 1242 4.9E-7
PANTHER PTHR43403 NAD-SPECIFIC GLUTAMATE DEHYDROGENASE IPR007780 NAD-glutamate dehydrogenase, bacteria 7 1615 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.