Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA3339
|
Name |
plpD
Synonym: PlpD |
Replicon | chromosome |
Genomic location | 3747525 - 3749711 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
RefSeq | NP_252029.1 |
GI | 15598535 |
Affymetrix | PA3339_at |
Entrez | 882504 |
GenBank | AAG06727.1 |
INSDC | AAG06727.1 |
NCBI Locus Tag | PA3339 |
protein_id(GenBank) | gb|AAG06727.1|AE004756_5|gnl|PseudoCAP|PA3339 |
TIGR | NTL03PA03339 |
UniParc | UPI00000C59C1 |
UniProtKB Acc | Q9HYQ6 |
UniProtKB ID | Q9HYQ6_PSEAE |
UniRef100 | UniRef100_Q9HYQ6 |
UniRef50 | UniRef50_Q4KGC6 |
UniRef90 | UniRef90_Q9HYQ6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
patatin-like protein, PlpD
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -11.28 |
Kyte-Doolittle Hydrophobicity Value | -0.245 |
Molecular Weight (kDa) | 80.9 |
Isoelectric Point (pI) | 5.14 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5FQU | TRANSPORT PROTEIN | 12/14/15 | Orthorhombic crystal structure of of PlpD (selenomethionine derivative) | PSEUDOMONAS AERUGINOSA PAO1 | 2.74 | X-RAY DIFFRACTION | 100.0 |
5FYA | HYDROLASE | 03/04/16 | Cubic crystal of the native PlpD | PSEUDOMONAS AERUGINOSA | 2.141 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 387 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG002289 (484 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA3339
Search term: plpD
Search term: patatin-like protein, PlpD
|
Ensembl
110, assembly
GRCh38.p14
|
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value:
3.4e-25
Percent Identity:
29.6
|
Ensembl
110, assembly
GRCh38.p14
|
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value:
3.4e-25
Percent Identity:
29.6
|
Ensembl
110, assembly
GRCh38.p14
|
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value:
3.4e-25
Percent Identity:
29.6
|
Ensembl
110, assembly
GRCh38.p14
|
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value:
3.4e-25
Percent Identity:
29.6
|
Ensembl
110, assembly
GRCh38.p14
|
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
E-value:
3.4e-25
Percent Identity:
29.6
|
The Pseudomonas aeruginosa patatin-like protein PlpD is the archetype of a novel Type V secretion system.
Salacha R, Kovacić F, Brochier-Armanet C, Wilhelm S, Tommassen J, Filloux A, Voulhoux R, Bleves S
Environ. Microbiol. 2010 Jun;12(6):1498-512
PubMed ID: 20192961
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|