Pseudomonas aeruginosa PAO1, PA3866

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019835 cytolysis
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 7721800 Reviewed by curator
Biological Process GO:0050896 response to stimulus
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000044
sequence similarity evidence
Biological Process GO:0009617 response to bacterium
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004540 ribonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF12106
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019835 cytolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004519 endonuclease activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005102 signaling receptor binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Secreted Factors (toxins, enzymes, alginate) Other PAO1 genes in this class
Adaptation, Protection Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF06958 S-type Pyocin IPR016128 Pyosin/cloacin translocation domain 519 663 3.1E-36
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 420 441 4.1E-10
Pfam PF12106 Colicin E5 ribonuclease domain IPR021964 Colicin E5 ribonuclease domain 669 757 6.4E-37
Coils Coil Coil - - 329 349 -
MobiDBLite mobidb-lite consensus disorder prediction - - 697 721 -
Gene3D G3DSA:3.30.2310.30 - IPR038234 Colicin E5 ribonuclease domain superfamily 663 764 1.4E-31
Coils Coil Coil - - 381 405 -
SUPERFAMILY SSF69369 Cloacin translocation domain IPR036302 Pyosin/cloacin translocation domain superfamily 457 692 6.02E-49
Coils Coil Coil - - 64 87 -
Coils Coil Coil - - 182 216 -
SUPERFAMILY SSF102824 Colicin D/E5 nuclease domain IPR038233 Colicin D/E5 nuclease domain superfamily 671 763 2.56E-35
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 466 484 4.1E-10
PRINTS PR01300 Pyocin S killer protein signature IPR003060 Pyocin S killer protein 501 524 4.1E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.