Pseudomonas aeruginosa PAO1, PA4396

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Two-component regulatory systems Other PAO1 genes in this class
Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Two-component System ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 53 167 2.3E-21
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 51 167 1.1E-23
CDD cd17574 REC_OmpR - - 54 156 4.8697E-23
Gene3D G3DSA:3.40.50.2300 - - - 46 176 7.7E-27
Coils Coil Coil - - 177 197 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 50 193 2.28E-28
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 188 361 7.1E-17
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 200 327 6.9E-12
SMART SM00267 duf1_3 IPR000160 GGDEF domain 187 355 2.3E-5
PANTHER PTHR43214 TWO-COMPONENT RESPONSE REGULATOR IPR039420 Transcriptional regulatory protein WalR-like 25 251 5.5E-20
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 203 355 7.53E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.