Pseudomonas aeruginosa PAO1, PA4723
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AlgU binding site | 5302200 | 5302237 | + |
|
Details | |
| Inverted repeat: CGGGGTCGACC-N67-GGTCGACCCCG | 5301848 | 5301936 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Shine-Dalgarno sequence | 5302200 | 5302202 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details | |
| Shine-Dalgarno sequence | 5302373 | 5302376 | + |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: ACGGGGCGCC-N2-GGCGCCCCGT | 5302842 | 5302863 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1282 | 5302843 | 5302862 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |