Pseudomonas aeruginosa PAO1, PA5002 (dnpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Operons

Operon name: PA5005-PA5004-PA5003-PA5002 (4 gene members)
Experiment Attributes
method: Identified by RNA-Seq in P. aeruginosa UCBPP-PA14. PAO1 coordinates identified by BLASTN.
Locus Tag Gene Name Description Start End Strand Type
PA5002 dnpA de-N-acetylase involved in persistence, DnpA 5619608 5621026 - CDS
Gene Details
PA5003 Mig-14-like protein 5621030 5621926 - CDS
Gene Details
PA5004 wapH WapH 5621920 5623056 - CDS
Gene Details
PA5005 probable carbamoyl transferase 5623040 5624797 - CDS
Gene Details
Evidence
Transcription unit experimentally validated in a strain of the same species. The start coordinate will often be based on an experimentally validated transcription start site. For protein-coding genes, unless otherwise specified, the stop will be based on the stop codon.
References
The single-nucleotide resolution transcriptome of Pseudomonas aeruginosa grown in body temperature.
Wurtzel O, Yoder-Himes DR, Han K, Dandekar AA, Edelheit S, Greenberg EP, Sorek R, Lory S.
PLoS Pathog. 2012 Sep;8(9):e1002945.
PubMed ID: 23028334
Cross-References
PseudoCAP: 1034