Pseudomonas aeruginosa PAO1, PA5261 (algR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| transcriptional initiation site (+1) | 5923362 | 5923362 | - |
|
Details | |
| AlgU binding site | 5923362 | 5923397 | - |
|
Details | |
| algR promoter | 5923358 | 5923406 | - |
|
7961422 | Details |
| P1 algR | 5923358 | 5923407 | - |
|
Details | |
| promoter at algR1 | 5923358 | 5923407 | - |
|
2510718 | Details |
| promoter at algR | 5923359 | 5923408 | - |
|
2140147 | Details |
| deleted fragment at algR | 5923343 | 5923443 | - |
|
2140147 | Details |
| AlgU binding site | 5923363 | 5923398 | - |
|
Details | |
| AlgU binding site | 5923363 | 5923398 | - |
|
11807066 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| hemC promoter | 5922453 | 5922502 | - |
|
8159168 | Details |
| Shine-Dalgarno sequence | 5922443 | 5922445 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |