Pseudomonas aeruginosa UCBPP-PA14, PA14_18580 (algD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| algD promoter | 1595670 | 1595718 | - |
|
7961422 | Details |
| algD promoter | 1595671 | 1595719 | - |
|
3108855 | Details |
| algD promoter | 1595671 | 1595719 | - |
|
2167423 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
2121708 | Details |
| algD promoter region | 1595729 | 1595785 | - |
|
3149945 | Details |
| AlgT site at algD gene | 1595681 | 1595710 | - |
|
10792721 | Details |
| RpoN site at algD gene | 1595681 | 1595711 | - |
|
10792721 | Details |
| RpoN retarded fragment of algD promoter | 1595620 | 1595779 | + |
|
10792721 | Details |
| RpoN protected fragment at algD promoter | 1595681 | 1595711 | - |
|
10792721 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
2496102 | Details |
| AlgR retarded fragment I upstream of algD gene | 1595449 | 1595838 | + |
|
1907266 | Details |
| AlgR retarded fragment II upstream of algD gene | 1595550 | 1595838 | + |
|
1907266 | Details |
| AlgR retarded fragment III upstream of algD gene | 1595384 | 1595726 | + |
|
1907266 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
1899859 | Details |
| algD promoter | 1595671 | 1595720 | - |
|
9218775 | Details |
| CysB binding site at algD gene | 1595547 | 1595592 | - |
|
9218775 | Details |
| CysB retarded fragment 0 at algD gene | 1595407 | 1595652 | + |
|
9218775 | Details |
| CysB retarded fragment 1 at algD gene | 1595547 | 1595693 | + |
|
9218775 | Details |
| CysB retarded fragment 2 at algD gene | 1595479 | 1595602 | + |
|
9218775 | Details |
| CysB retarded fragment 3 at algD gene | 1595547 | 1595698 | + |
|
9218775 | Details |
| IHF binding fragment A at algD gene | 1595547 | 1595721 | + |
|
9218775 | Details |
| IHF binding fragment B at algD gene | 1595526 | 1595700 | + |
|
9218775 | Details |
| IHF binding fragment C at algD gene | 1595505 | 1595679 | + |
|
9218775 | Details |
| IHF binding fragment D at algD gene | 1595486 | 1595660 | + |
|
9218775 | Details |
| IHF binding fragment E at algD gene | 1595427 | 1595601 | + |
|
9218775 | Details |
| algD promoter region | 1595729 | 1595785 | - |
|
2109318 | Details |
| AlgR retarded RB3 fragment at algD gene | 1595661 | 1595827 | - |
|
1400214 | Details |
| AlgR protected RB3 fragment at algD gene | 1595690 | 1595720 | - |
|
1400214 | Details |
| AlgR retarded RB2 fragment at algD gene | 1595798 | 1595827 | - |
|
1400214 | Details |
| IHF retarded fragment at algD gene | 1595571 | 1595775 | + |
|
Details | |
| IHF-binding element 1-1 | 1595735 | 1595775 | - |
|
Details | |
| IHF-binding element 1-2 | 1595735 | 1595775 | - |
|
Details | |
| IHF-binding element 2 | 1595571 | 1595604 | - |
|
Details | |
| IHF binding site at algD gene | 1595726 | 1595755 | - |
|
1472055 | Details |
| IHF protected fragment at algD gene | 1595725 | 1595760 | - |
|
1472055 | Details |
| algD promoter | 1595471 | 1595720 | - |
|
11443106 | Details |
| algD promoter | 1595471 | 1595720 | - |
|
Details | |
| AlgU predicted site upstream of algD gene | 1595459 | 1595708 | - |
|
Details | |
| algD promoter | 1595471 | 1595720 | - |
|
14645293 | Details |
| AlgB binding fragment upstream of algDKEGLIJF oper | 1595698 | 1595947 | - |
|
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGGCGTGCGC-N14-GCGCACGCCG | 1593894 | 1593927 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |