Pseudomonas aeruginosa PAO1, PA0225

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA0225
Name
Replicon chromosome
Genomic location 254791 - 255330 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_248916.1
GI 15595422
Affymetrix PA0225_at
Entrez 880191
GenBank AAG03614.1
INSDC AAG03614.1
NCBI Locus Tag PA0225
protein_id(GenBank) gb|AAG03614.1|AE004460_7|gnl|PseudoCAP|PA0225
TIGR NTL03PA00226
UniParc UPI00000C4FA8
UniProtKB Acc Q9I6R3
UniProtKB ID Q9I6R3_PSEAE
UniRef100 UniRef100_U8MFK4
UniRef50 UniRef50_A6UY22
UniRef90 UniRef90_A6UY22

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -0.32
Kyte-Doolittle Hydrophobicity Value -0.293
Molecular Weight (kDa) 20.0
Isoelectric Point (pI) 6.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 373 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000224 (449 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0225

Transposon Insertions in PAO1

Type ISphoA/hah insertion site
Mutant ID UWGC: 55936
Genomic Position 255286
Position in ORF 496(540)
Reference 14617778
Type ISphoA/hah insertion site
Mutant ID UWGC: 44744
Genomic Position 255081
Position in ORF 291(540)
Reference 14617778

Transposon Insertions in Orthologs

Type MAR2xT7 transposon (wild type background) insertion site
Strain Pseudomonas aeruginosa UCBPP-PA14
Locus Tag PA14_02750
Mutant ID PA14NR: 24922
Genomic Position 245027
Position in ORF 86(540)
Reference 16477005

References

No references are associated with this feature.