Pseudomonas aeruginosa PAO1, PA3539

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA3539
Name
Synonym: yaaA
Replicon chromosome
Genomic location 3961144 - 3961923 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_252229.1
GI 15598735
Affymetrix PA3539_at
Entrez 879009
GenBank AAG06927.1
INSDC AAG06927.1
NCBI Locus Tag PA3539
protein_id(GenBank) gb|AAG06927.1|AE004774_5|gnl|PseudoCAP|PA3539
TIGR NTL03PA03539
UniParc UPI00000C5A5E
UniProtKB Acc Q9HY72
UniProtKB ID Y3539_PSEAE
UniRef100 UniRef100_B7UUV7
UniRef50 UniRef50_Q1CMW4
UniRef90 UniRef90_B7UUV7

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -0.80
Kyte-Doolittle Hydrophobicity Value -0.410
Molecular Weight (kDa) 29.6
Isoelectric Point (pI) 6.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 220 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002127 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3539

Human Homologs

References

Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes.
Burland V, Plunkett G 3rd, Sofia HJ, Daniels DL, Blattner FR
Nucleic Acids Res 1995 Jun 25;23(12):2105-19
PubMed ID: 7610040