Pseudomonas aeruginosa PAO1, PA3169

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
Locus Tag
PA3169
Name
Replicon chromosome
Genomic location 3559435 - 3560511 (- strand)
Transposon Mutants 4 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs
CommentGene association from reference. Biochemical evidence for pathway. Listed in NCBI as 5-methylthioribulose-1-phosphate isomerase.

Cross-References

RefSeq NP_251859.1
GI 15598365
Affymetrix PA3169_at
DNASU PaCD00007395
Entrez 882801
GenBank AAG06557.1
INSDC AAG06557.1
NCBI Locus Tag PA3169
protein_id(GenBank) gb|AAG06557.1|AE004741_2|gnl|PseudoCAP|PA3169
TIGR NTL03PA03169
UniParc UPI00000C5933
UniProtKB Acc Q9HZ65
UniProtKB ID MTNA_PSEAE
UniRef100 UniRef100_B7V9J7
UniRef50 UniRef50_Q4ZQ92
UniRef90 UniRef90_A6V2Q6

Product

Feature Type CDS
Coding Frame 1
Product Name
5-methylthioribose-1-phosphate isomerase MtnA
Product Name Confidence: Class 2
Synonyms probable initiation factor 2 subunit (class 3)
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -10.08
Kyte-Doolittle Hydrophobicity Value -0.163
Molecular Weight (kDa) 39.4
Isoelectric Point (pI) 5.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 357 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002446 (559 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA3169

Human Homologs

Ensembl 86, assembly GRCh38.p7
methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]
E-value: 8.5e-65
Percent Identity: 44.0

References

No references are associated with this feature.