Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5389
|
Name |
cdhR
|
Replicon | chromosome |
Genomic location | 6067005 - 6068015 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Comment | Deletion of cdhR results in a strain unable to grow using L-carnitine as a sole carbon source.;CdhR regulates the transcriptional induction of the adjacent PA5388 gene in response to L-carnitine. |
RefSeq | NP_254076.1 |
GI | 15600582 |
Affymetrix | PA5389_at |
Entrez | 880749 |
GenBank | AAG08774.1 |
INSDC | AAG08774.1 |
NCBI Locus Tag | PA5389 |
protein_id(GenBank) | gb|AAG08774.1|AE004951_8|gnl|PseudoCAP|PA5389 |
TIGR | NTL03PA05390 |
UniParc | UPI00000C5FDA |
UniProtKB Acc | Q9HTH5 |
UniProtKB ID | CDHR_PSEAE |
UniRef100 | UniRef100_Q9HTH5 |
UniRef50 | UniRef50_Q9HTH5 |
UniRef90 | UniRef90_Q9HTH5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
CdhR, transcriptional regulator
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 3.90 |
Kyte-Doolittle Hydrophobicity Value | -0.135 |
Molecular Weight (kDa) | 37.1 |
Isoelectric Point (pI) | 9.00 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 402 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004948 (479 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5389
Search term: cdhR
Search term: CdhR, transcriptional regulator
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|