Pseudomonas entomophila L48, PSEEN0132 (pvfC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas entomophila L48
Locus Tag
PSEEN0132
Name
pvfC
Replicon chromosome
Genomic location 121613 - 125044 (- strand)

Cross-References

RefSeq YP_605926.1
GI 104779428
Entrez 4087801
INSDC CAK13109.1
UniParc UPI0000D77F0A
UniProtKB Acc Q1IGU3
UniProtKB ID Q1IGU3_PSEE4
UniRef100 UniRef100_Q1IGU3
UniRef50 UniRef50_D7I6L3
UniRef90 UniRef90_Q1IGU3

Product

Feature Type CDS
Coding Frame 1
Product Name
PvfC
Product Name Confidence: Class 1
Evidence for Translation
Charge (pH 7) -15.43
Kyte-Doolittle Hydrophobicity Value -0.166
Molecular Weight (kDa) 126749.0
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 549 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018985 (68 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN0132
Search term: pvfC
Search term: PvfC

Human Homologs

Ensembl 86, assembly GRCh38.p7
solute carrier family 27 member 3 [Source:HGNC Symbol;Acc:HGNC:10997]
E-value: 2.3e-07
Percent Identity: 22.8

References

A secondary metabolite acting as a signalling molecule controls Pseudomonas entomophila virulence.
Vallet-Gely I(1), Opota O, Boniface A, Novikov A, Lemaitre B.
Cell Microbiol. 2010 Nov;12(11):1666-79.
PubMed ID: 20597908