Pseudomonas aeruginosa PAO1, PA4236 (katA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| OxyR binding site | 4753824 | 4753838 | + |
ECO:0000314
direct assay evidence used in manual assertion |
19648236 | Details |
| PhoB binding site | 4753865 | 4753882 | - |
ECO:0000314
direct assay evidence used in manual assertion |
17400767 | Details |
| Inverted repeat: AAACCGGGCC-N2-GGCCCGGTTT | 4753951 | 4753972 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1075 | 4753954 | 4753969 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 4753716 | 4753720 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Palindrome | 4752219 | 4752240 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 1074 | 4752219 | 4752240 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Shine-Dalgarno sequence | 4752139 | 4752142 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |