Strain |
Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest |
Locus Tag |
PA14_52570
|
Name |
rsmA
|
Replicon | chromosome |
Genomic location | 4660393 - 4660578 (- strand) |
Transposon Mutants | 1 transposon mutants in UCBPP-PA14 |
RefSeq | YP_792371.1 |
GI | 116048829 |
Entrez | 4383136 |
INSDC | ABJ10065.1 |
NCBI Locus Tag | PA14_52570 |
UniParc | UPI00001285B6 |
UniProtKB Acc | Q02I65 |
UniProtKB ID | CSRA_PSEAB |
UniRef100 | UniRef100_B7UY29 |
UniRef50 | UniRef50_Q5E7G3 |
UniRef90 | UniRef90_A4VJB5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
carbon storage regulator
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 0.46 |
Kyte-Doolittle Hydrophobicity Value | -0.446 |
Molecular Weight (kDa) | 6.9 |
Isoelectric Point (pI) | 7.70 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
rsmA | rsmA is a gene that regulates virulence of Pseudomonas aeruginosa. However, its negative effect on MexEF-OprN overexpression has been noted to confer resistance to various antibiotics. It's Escherichia coli homolog is csrA. [PMID:16622241, PMID:11673439] | ARO:3005069 | protein homolog model | Perfect | 117.1 | 100.0 | 3.2.5 |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7YR7 | RNA BINDING PROTEIN/RNA | 08/09/22 | Cryo-EM structure of Pseudomonas aeruginosa RsmZ RNA in complex with three RsmA protein dimers | Pseudomonas aeruginosa | 3.8 | ELECTRON MICROSCOPY | 100.0 |
7YR6 | RNA BINDING PROTEIN/RNA | 08/09/22 | Cryo-EM structure of Pseudomonas aeruginosa RsmZ RNA in complex with two RsmA protein dimers | Pseudomonas aeruginosa | 4.8 | ELECTRON MICROSCOPY | 100.0 |
1VPZ | RNA BINDING PROTEIN | 11/24/04 | Crystal structure of a putative carbon storage regulator protein (csra, pa0905) from pseudomonas aeruginosa at 2.05 A resolution | Pseudomonas aeruginosa | 2.05 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000872 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_52570
Search term: rsmA
Search term: carbon storage regulator
|
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A
Proc Natl Acad Sci U S A 2017 Jul 18;114(29):7707-7712
PubMed ID: 28673999
|