Pseudomonas aeruginosa PAO1, PA0048

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA0048
Name
Replicon chromosome
Genomic location 62403 - 62786 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_248738.1
GI 15595246
Affymetrix PA0048_at
Entrez 877666
GenBank AAG03438.1
INSDC AAG03438.1
NCBI Locus Tag PA0048
protein_id(GenBank) gb|AAG03438.1|AE004444_7|gnl|PseudoCAP|PA0048
TIGR NTL03PA00049
UniParc UPI00000C4F02
UniProtKB Acc Q9I784
UniProtKB ID Q9I784_PSEAE
UniRef100 UniRef100_W1MX70
UniRef50 UniRef50_B7V0T5
UniRef90 UniRef90_B7V0T5

Product

Feature Type CDS
Coding Frame 1
Product Name
probable transcriptional regulator
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) 5.41
Kyte-Doolittle Hydrophobicity Value -0.302
Molecular Weight (kDa) 14.4
Isoelectric Point (pI) 10.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 27 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000048 (298 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0048

Human Homologs

References

No references are associated with this feature.